STARK

Overview

  • What’s the STARK?

CLI_TUTORIAL

  • install the STARK
  • preprocess the sc3DG
  • 3D model the sc3DG
  • Get imputed contact map
  • Calculate the normlized detection score
  • Accumlated Analysis
  • Merge the topN/bottomN cell
  • Spatial Structure Capture Efficiency
  • calculate the GiniQC
  • detect the loop
  • EmptyCells
  • Clustering
STARK
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